This report summarises step 1 of the GTA cleaning (scripts/01_DATA_CLEANING/GTA/1_CLEAN_GTAS.R).

The number of GTAs per data source:

The number of GTAs per species per state

The number of bovine GTAs per state

The % of GTAs dropped per cleaning stage

The number of GTAs per year

Here we breakdown the number of GTAs per year, for species of interest to SEI-PCS (cattle, pork, poultry).

The % of slaughter GTAs

Here I focus on species of interest for SEI-PCS.

The main movement types

## # A tibble: 5 x 5
## # Groups:   SPECIES [1]
##   SPECIES destination.type    species.purpose PERC_GTAS CUM_PERC
##   <chr>   <chr>               <chr>               <dbl>    <dbl>
## 1 BOV     <NA>                ENGORDA              22.5     22.5
## 2 BOV     EXPLORACAO          ENGORDA              14.4     36.9
## 3 BOV     <NA>                ABATE                14.2     51.1
## 4 BOV     ABATEDOURO          ABATE                11.8     62.9
## 5 BOV     EXPLORACAO PECUARIA ENGORDA              11.8     74.7
## # A tibble: 5 x 5
## # Groups:   SPECIES [1]
##   SPECIES destination.type    species.purpose PERC_GTAS CUM_PERC
##   <chr>   <chr>               <chr>               <dbl>    <dbl>
## 1 POR     ABATEDOURO          ABATE               29.2      29.2
## 2 POR     <NA>                ABATE               28.4      57.6
## 3 POR     <NA>                ENGORDA             16.4      74.1
## 4 POR     EXPLORACAO          ENGORDA              8.81     82.9
## 5 POR     EXPLORACAO PECUARIA ENGORDA              4.40     87.3
## # A tibble: 5 x 5
## # Groups:   SPECIES [1]
##   SPECIES destination.type species.purpose               PERC_GTAS CUM_PERC
##   <chr>   <chr>            <chr>                             <dbl>    <dbl>
## 1 POU     <NA>             ABATE                             34.5      34.5
## 2 POU     ABATEDOURO       ABATE                             28.9      63.4
## 3 POU     EXPLORACAO       ENGORDA                            6.23     69.6
## 4 POU     <NA>             AGLOMERACAO COM FINALIDADE C~      5.87     75.5
## 5 POU     EXPLORACAO       INCUBACAO                          5.57     81.1

The number of cattle slaughtered per state/year

The ages of slaughtered cattle/state

The % of GTAs with missing animal numbers

Overall, 74.6% of SC’s cattle GTAs were missing information on the number of animals per batch, which is 4.52% of all cattle GTAs.

Add GTAs dropped for missing animals info here

Missing information

GTAs between the same owner